St Jude ALL Dataset 4 Chips

Date: May 31, 2005 (updated Jul 12, 2005)
Submitter: Ben Bolstad
Chip Type: HGU133A
Fitting Function: RMAExpress version 0.4 alpha 5
Comments From the Submitter: These are all the chips from a large public dataset:

Amy Holleman, Meyling H. Cheok, Monique L. den Boer, Wenjian Yang, Anjo J.P. Veerman, Karin M. Kazemier, Deqing Pei, Cheng Cheng, Ching-Hon Pui, Mary V. Relling, Gritta E. Janka-Schaub, Rob Pieters, and William E. Evans Gene-expression patterns in drug resistant acute lymphoblastic leukemia cells and response to treatment. New England Journal of Medicine 2004; 351

There are two artifacts that appear on a number of chips in this data set. One I refer to as ripples on a pond and the second as fleets of flying saucers.

Data Source: Supplementary Data from Holleman et al.
Click here to download a zip archive containing fullsize images
Return to index
Note that if you use the images for personal use on this page you should cite this website. In cases where the contributor is named please get permission directly from the contributor. Permission is not given for formal publications.